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Our Team

Assaf Zaritsky

Assaf Zaritsky

Principal Investigator

Computational cell dynamics

Amos Zamir

Amos Zamir

Ph.D. student

Amos is developing and applying methods methods for quantitative spatiotemporal characterization across scales of multicellular synchronization and organization.

Esraa Nsasra

Esraa Nsasra

Ph.D. student

Esraa is developing methods for quantitative spatiotemporal characterization of heterogeneous collective death in cell population.

Leor Ariel Rose

Leor Ariel Rose

Ph.D. student

Leor is developing methods for analysis and integration of multimodal bioimaging data.

Nitai Halle

Nitai Halle

M.Sc. student

Nitai is developing a method to optimize the antibody panel selection for multiplexed single cell spatial proteomics technologies

Nitsan Elmalam

Nitsan Elmalam

M.Sc. student

Nitsan is studying the interplay between cell context and cross modality bioimage translation.

Gad Miller

Gad Miller

M.Sc. Student

Gad is working on long-range cell-cell mechanical communication.

Orit Kliper Gross

Orit Kliper Gross

Research Associate

Orit is mentoring students in multiple diverse projects, advising on computational and technical issues, formulating challenging research questions and keeping contact with collaborators.

Oded Rotem

Oded Rotem

Ph.D. student

Oded is developing methods for visual interpretability of deep learning models and applies then to the domain of in vitro fertilization (IVF)

Guy Shpringer

Guy Shpringer

Ph.D. student

Guy is developing methods to measure cell biological state transitions from the macromolecular to the cellular scales.

Sarit Hollander

Sarit Hollander

M.Sc. student

Sarit is developing a method to measure intracellular information transfer.

Noy Salomon

Noy Salomon

M.Sc. student

Noy is investigating the coupling between single cell signaling dynamics and multicellular synchronization.

Mark Oulitin

Mark Oulitin

M.Sc. student

Mark is developing methods to analyze spatial metallomics data and apply them to triple negative breast cancer patient samples.

Alon Shpigler

Alon Shpigler

Ph.D. student

Alon is developing methods to measure alterations in intracellular organization via microscopy-based high-content phenotypic screening and generative neural networks

Yuval Tamir

Yuval Tamir

Ph.D. student

Yuval is investigating the interplay between cell morphology and its intracellular molecular composition and organization

Lion Ben Nedava

Lion Ben Nedava

Ph.D. student

Lion is developing a method for visual interpretation of image-to-image transformation models and apply it to understand in-silico organelle localization.

Ariel Bereslavsky

Ariel Bereslavsky

M.Sc. student

Ariel is developing data-driven structural inference of biomolecular complexes in cells from super resolution microscopy data.

Leah Wachtfogel

Leah Wachtfogel

M.Sc. student

Leah is investigating the brain vasculature structure in Glioblastoma (GBM) patients data.

Reut Mealem

Reut Mealem

M.Sc. Student

Reut is performing integrated analysis of fluorescence lifetime imaging microscopy (FLIM) and imaging mass cytometry (IMC) in the context of triple negative breast cancer tissue samples.

Alumni

Assaf Nahum, M.Sc. 2021, Quantifying the dynamics of long-range cell-cell mechanical communication.

Itay Erlich, Ph.D. 2021 (HUJI), Methods for predicting in vitro fertilization (IVF) embryo developmental potential by machine learning algorithms of video streaming data.

Noam Tzukerman, M.Sc., 2022, Using unlabeled information of embryo siblings from the same cohort cycle to enhance in vitro fertilization implantation prediction.

Kathrine (Katya) Smoliansky, M.Sc., 2022, Applying in silico labeling via transfer learning as a tool to dissect organelle-organelle spatial dependencies.

Yishaia Zabary, M.Sc., 2022, Bottom up modular characterization of sparse spatial biological networks: applications in cell death and brain vasculature.

Amit Shakarchy, M.Sc., 2023, Machine learning inference of continuous single-cell state transitions during myoblast differentiation and fusion.

Naor Kolet, M.Sc., 2023, Anomaly detection for sensitive hits identification in high-content image-based phenotypic screens.

Saar Ben David, M.Sc., 2023, Formation of recurring transient Ca2+-based intercellular communities in the developing Drosophila lymph gland.

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